CDS

Accession Number TCMCG016C22848
gbkey CDS
Protein Id OMO60411.1
Location complement(join(13318..13479,13673..13799,13895..14025,14233..14274,14370..14408,14494..14586,14676..14771,14873..14977,15189..15365,15451..15526,15617..15696,15808..15903,15990..16350,16697..16828,17012..17087,17196..17271))
Organism Corchorus capsularis
locus_tag CCACVL1_24173

Protein

Length 622aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01013701.1
Definition DNA polymerase alpha/epsilon, subunit B [Corchorus capsularis]
Locus_tag CCACVL1_24173

EGGNOG-MAPPER Annotation

COG_category L
Description May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha primase complex to the cellular replication machinery
KEGG_TC -
KEGG_Module M00261        [VIEW IN KEGG]
KEGG_Reaction R00375        [VIEW IN KEGG]
R00376        [VIEW IN KEGG]
R00377        [VIEW IN KEGG]
R00378        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K02321        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03030        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
GOs GO:0000082        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005658        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006270        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0030894        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0032201        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0033260        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0043601        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044770        [VIEW IN EMBL-EBI]
GO:0044772        [VIEW IN EMBL-EBI]
GO:0044786        [VIEW IN EMBL-EBI]
GO:0044843        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046982        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAAGAGATCAAAGCAGAGTTCTTGAAGAGCGGATTCACTCTTCAAGACGAAGAAGAGATACTCAAGAAATGCCATACCTTTTGTCTAAATTACAGTCTCCAGCCTTCCTATCTCGTCTCAAGCTGGGAGGTTTATTATCTCAACAGACAACTTGATGAACCAGTTGTTAAGGATGAAGATATGGATGGGTTTTTGGGGCAGCTGCAGAATGAACAAGTAGAGGCGGTTGTTAAGAAGGAGCCCAGTTTGCATATGTACTCTTACAAAGATGTTGACATGATTTTAGATGCTGAAGATGAAGATATGAAAGAAGTCATTGTTGGAACTCCGCCACCAACCAAATCTGAGATTTATTCAGATGTATATGACTCAGTCCCCCCCAAACCAAGTCGTAACATTTATTCTTCTGAGAGGAAATCAAAAGAGACACCATTTGGGAAACGAAGTAATACTTTTGTGGTGAAATTCAGCATGGATAATCTTCCTATGACAGAGACTGTGAATGGCAAGCATGATCATGAGAATCTCGAAGATGACATTATTAAGAGGAACCAACCTCATAACAGCTGTTCATTAGTTGTACAGAAATCAGGGCCAGAACCAGGTTGCAGGTTCATGTATGACAGGACTGAAGACCGGTTCAATGCACTTGAGAACCGCATTAAAAGACATGCTGATGCACTTGTTGCATCCGGGCTGTTTGAAGAACCCATGGATCCATCAGTTGCTTCACAAAGGAGCATATTTGCCGTTGGAATGATCTGCTGTGACGGCGAGGGTCATTTAAATGATAAGTCCATCTTATTGCAAAGCAGTGTTGAGCATTCTGGAGGGCAACGTGTTCGACTAGATTTAAATAAACTAAGCCACTTTTCTTTTTTCCCAGGCCAGGTGGTTGGCATCAAGGGTCACAATCCAAGTGGGCATTGTTTAATCGCATCTGAACTGGTAGATTTTGTTCCTCCATCCCTTGTTGCTGATACGAATTTGCCTCCTGCCAAGAAGCAAGCTTTAGATGTGGAGATTCAGGCAACAAATGGTTCCTGCACGCCAACAGAGACATCAGTGATTATTGCTGCTGGGCCATTCACTACTACAGACAACTTATTATTTGAGCCTCTGAATGAACTGCTTAAATATGCAACAAGAAAGTGGCCACAGTTGCTTATACTGTTAGGACCTTTCATTGATTCTGAACATCCGCAGATTAAGAAAGGAATGGTTGACTTGAGTTTTGATGAATTATTTGAATCGGAGATTCTTAGAATGGTGCAAGATTATTTGGCATATATGGGTTCCAATGCACGCGTGGTTCTCATTCCATCTATACGAGATGCTAATCATGACTTTGTTTTCCCTCAGCCTCCTTTCGACGTTGATTCCCTCGATCTTAAACACCAGATAGCCTGTCTCACAAATCCAGGGATTTTTTATGCAGATGAGGTCAAGATAGGTTGCTGCACTGTAGATATTCTTAAACATCTTAGTGGAGAGGAGATGTCACGACATCCAATGGATGGAACACCTAGTGATCGCTTGAGTAGACTAGCCACTCATATTCTTAACCAGCGCAACTTTTATCCACTGCATCCACCAGCAGAAGGTGTCCCATTGGATTCCTCGCTTGCTCCTGAAGCTCTTCAAATTGCTTCAGTTCCGGATCTTCTTATCTTACCTTCAGACATCAAATACTTTGTAAAGGTTTTATCTCTTCCCGGAACAACTGAAGGGGAAGAAAAAACCAAAAAATGTGTTTGTATTAATCCAGGAAGACTAGCTAAGGGAGAGGGCGGAGGCACCTTTGCGGAGCTCAAATACCAAGGGAGTCTCGATAAGATGAATGCTTCAATAATTGCCATATGA
Protein:  
MEEEIKAEFLKSGFTLQDEEEILKKCHTFCLNYSLQPSYLVSSWEVYYLNRQLDEPVVKDEDMDGFLGQLQNEQVEAVVKKEPSLHMYSYKDVDMILDAEDEDMKEVIVGTPPPTKSEIYSDVYDSVPPKPSRNIYSSERKSKETPFGKRSNTFVVKFSMDNLPMTETVNGKHDHENLEDDIIKRNQPHNSCSLVVQKSGPEPGCRFMYDRTEDRFNALENRIKRHADALVASGLFEEPMDPSVASQRSIFAVGMICCDGEGHLNDKSILLQSSVEHSGGQRVRLDLNKLSHFSFFPGQVVGIKGHNPSGHCLIASELVDFVPPSLVADTNLPPAKKQALDVEIQATNGSCTPTETSVIIAAGPFTTTDNLLFEPLNELLKYATRKWPQLLILLGPFIDSEHPQIKKGMVDLSFDELFESEILRMVQDYLAYMGSNARVVLIPSIRDANHDFVFPQPPFDVDSLDLKHQIACLTNPGIFYADEVKIGCCTVDILKHLSGEEMSRHPMDGTPSDRLSRLATHILNQRNFYPLHPPAEGVPLDSSLAPEALQIASVPDLLILPSDIKYFVKVLSLPGTTEGEEKTKKCVCINPGRLAKGEGGGTFAELKYQGSLDKMNASIIAI